SNRE Labs and Facilities

Biodiversity Lab

Dana Building - 1556 and 1568
Professor Bradley Cardinale

This analytical lab studies freshwater biodiversity, including algae and invertebrates that inhabit streams and lakes of North America and focuses on understanding how biodiversity loss affects the goods and services that nature provides humanity. Most of the lab works are in freshwater habitats, with extension into marine and terrestrial systems to gain new insights and generalities. Its research has helped guide efforts to conserve and restore natural ecosystems.

The "Flume Room"

Dana Building - G303
Professor Bradley Cardinale

This facility, finished in 2011, houses 140 re-circulating streams used to study how species extinction impacts water quality and O2 production.

Aquatic Mesocosm Lab (Flume Room)

Dana Building - G315
Professor Bradley Cardinale

Algal Growth Chamber

Dana Building - G120
Bradley Cardinale

This environmentally controlled chamber is used to grow algae and to assess how genetic diversity impacts the production of oxygen.

Disease Ecology and Conservation Biology Lab

Dana Building - 2064
Associate Professor Johannes Foufopoulos

The Animal Disease Lab investigates the ecology of parasitism and disease in vertebrates by studying the ecological, physiological and evolutionary aspects of host-parasite interactions. The lab has an environmental chamber and is equipped with dissecting microscopes, microscope cameras, and a -80 °C ultrafreeze, as well as additional equipment for ornithological, herpetological and wildlife field research. An integrative approach is employed with methodologies borrowed from field ecology, comparative physiology, ecological immunology, evolutionary biology and population genetics. Especially, the lab focuses on studying human influence on natural ecosystems, including how habitat fragmentation, global climate change and emerging pathogens impact global biodiversity and ecosystem function.

Global Change Ecology Lab

Dana Building - 2503
Associate Professor Inés Ibáñez

This lab examines the challenges that plant communities face in the context of global change (i.e. climate change, invasive species and landscape fragmentation). These challenges are interconnected as they form the novel environment under which plants are growing. The fact that forest communities are highly dependent on recruitment dynamics makes the study of early demographic stages critical for understanding the impact of global change on the natural ecosystems around us. To isolate these phenomena, this lab directs research at the recruitment of dominant tree species, from seed production to the sapling stage, including seed dispersal, germination, establishment and survival during the first years. By focusing on the actual demographic responses of plant species to a changing environment, results will be essential to forecast reliable vegetation changes under future climate scenarios.

Ecosystem Modeling Lab

Dana Building - 2531
Associate Professors William Currie and Inés Ibáñez

To analysis field data, the Ecosystem Modeling Lab implements hierarchical Bayes models that quantify the effects of environmental variability on the studied species. The inferential models that they developed accommodated many unmeasurable factors that affected demographic processes and the data that derived from them. They are continuing the implementation of this modeling approach and are therefore committed to investigating how new developments in ecological modeling and statistical analysis can contribute to research programs.

Soil and Agroecosystems Lab

Dana Building - G573
Assistant Professor Jennifer Blesh

This lab explores food system sustainability in both domestic and international contexts in order to understand how different agricultural production systems affect ecological and social outcomes. Their biophysical research focuses on soil nitrogen and carbon cycles and agroecosystem nutrient management, with particular attention to the role of legume nitrogen sources, cover crops, and perennials for improving ecosystem efficiency and sustainability. Their mixed-methods research seeks to identify leverage points for food system transformation toward sustainability, including understanding sociopolitical and economic factors at multiple scales that support transitions toward ecologically-based management.

Zooplankton and Aquatic Ecology Lab

Dana Building - G574
Professor Don Scavia

This laboratory houses several camera-equipped microscopes, which are used to count, identify, and measure aquatic organisms, including fish larvae, zooplankton, and Mysis collected from inland lakes and the Great Lakes, as well as an environmental chamber, fume hood, and a -80 freezer. Current projects include studies of the long-term dynamics of Great Lakes zooplankton; the role of Mysis in Great Lakes food webs; herniations in zooplankton; reasons for the Diporeia decline in the Great Lakes; interactions among zooplankton, zebra and quagga mussels, and fish; and effects of contaminants on larval fish and recruitment.

Great Lakes Conservation Lab

Dana Building - G573

This lab addresses biological problems facing the Great Lakes, including the ecological impacts of invasive species like zebra mussels; changes in the survival and reproduction of fish; and changes in the composition of zooplankton that serve as fish food.

Ecosystem Management Initiative Lab

Dana Building - 3528
Professor Steve Yaffee

The Ecosystem Management Initiative (EMI) focuses on research and training in collaboration, negotiation, evaluation, and adaptive management.

Ecotoxicology Research Lab

Dana Building - G140
Professor Allen Burton

The Burton Ecotoxicology lab investigates ways to improve risk assessments of aquatic ecosystems by better linking exposure to stressors (chemical and physical) to adverse effects in biota. Particular focus on sediments and nonpoint source runoff and controlling factors of metal and organic chemical bioavailability. The laboratory has a variety of essential water and sediment quality sampling and assessment equipment/instrumentation, such as water quality sondes, sensors/electrodes, spectrophotometer, recirculating sediment flumes and has cultures of several species of organisms which are popular surrogates for toxicity threshold determinations.

Macroinvertebrate Culture Room

Dana Building - G301
Professor Allen Burton

In this room, we culture several species of organisms that are popular surrogates for toxicity threshold determinations.

Limnology Lab

Dana Building - G510
Professor Allen Burton

This lab has an analytical train to measure acid volatile sulfides in sediments. The space is also used for macroinvertebrate identification.

Aquatic Stressors Lab

Dana Building - 3536
Professor Allen Burton

Environmental Spatial Analysis Lab

Dana Building - 3315
Professor Daniel Brown

The Environmental Spatial Analysis Lab focuses on the application of remote sensing, GIS, and spatial modeling tools to a range environmental and social-environment questions and problems. Many projects focus on causes and consequences of land use change in many parts of the world, including Southeastern Michigan, Russia, China, and Africa. The lab contains a number of high end workstations and software licenses for processing satellite images, managing spatial databases, conducting spatial analyses and building spatial models. Many of the projects focus on land-use and land-cover change, but it is also used to collaborate on a wider range of projects.

Environmental Psychology Lab

Dana Building - 2034
Associate Professor Raymond De Young

The Environmental Psychology Lab examines the interrelationship between environments and human behavior. It includes, but is broader than, the study of coupled human and natural systems. The field develops such a model while retaining a broad and inherently multidisciplinary focus. Using this model it explores such dissimilar issues as common property resource management, the many sources of well-being, the effect of environmental distraction on human effectiveness, the characteristics of psychologically restorative environments, human information processing, and the promotion of environmental stewardship behavior. Environmental psychology recognizes the need to be problem-oriented, using, as needed, the theories and methods of related fields (e.g., psychology, sociology, anthropology, integrative medicine, economics, social work, planning, design, and landscape architecture).

Fish Conservation and Aquaculture Lab

Dana Building - G136
Professor Jim Diana

The Fish Conservation and Aquaculture Lab studies aquaculture’s potential contribution to the global food supply through the understanding of ecologically sensitive aquaculture practices, particularly in developing countries. Additionally, they study a variety of natural ecosystems, focusing mainly on native species, particularly pike and muskellunge. This facility houses a large recirculating-filtration system for a variety of aquatics experiments involving algae, invertebrates and fishes. The Fish Lab is comprised of two main aquarium rooms. It is approved as a live animal holding facility and is used for holding animals requiring water. It is equipped with swimming flumes and respirometers and can be used for live recording of behavior. The Aquatic Lab is designed around twin reservoirs. It is equipped for video recording and analysis, with high speed video cameras, underwater video cameras, video analyzers, digital monitors, frame grabbers and synchronization boards.

Aquatics Teaching Lab

Dana Building - G556
Professor Jim Diana

The Aquatic Lab is designed around twin reservoirs. It is equipped for video recording and analysis, with high speed video cameras, underwater video cameras, video analyzers, digital monitors, frame grabbers and synchronization boards.

Landscape Ecology, Perception, and Design Lab

Dana Building - 1550
Professor Joan Iverson Nassauer

The Landscape Ecology, Perception, and Design Lab investigates and tests landscape patterns and management regimes for their ecological and cultural effects. This lab analyzes conventional landscape patterns of forestry, agricultural and metropolitan areas and proposes designing and planning innovations to improve ecological quality. Disturbed landscapes at all scales are our subjects - from small urban lots to brownfields to greenfield subdivisions and agricultural watersheds. Interdisciplinary collaboration is essential to our work. Work in the lab is built on the theory of cultural sustainability - proposing and testing landscape change that the public will enjoy, value and maintain in order to sustain long term environmental benefits.

Behavioral, Ecology, and Conservation Lab

Dana Building - G142
Bobbi S. Low

Microbial Ecology and Biogeochemistry Labs

Terrestrial Ecology Teaching Lab

Dana Building - 2556
Professor Don Zak

This laboratory is designed to accommodate the wet lab teaching needs of all courses in Terrestrial Ecosystems. It currently is used to teach Soil Ecology, in which students use this laboratory space to conduct physical, chemical and biological analyses of soil samples collected in a wide range of terrestrial ecosystems. This laboratory contains an Inductively Coupled Plasma Spectrometer, which is used to determine the elemental composition of soil, plants as well as a wide range of environmental samples. It also contains hood space for the handling of hazardous materials and ample bench space for students to learn and conduct the analyses of soil and plant tissues.

Terrestrial Sample Preparation Lab

Dana Building - G528
Professor Don Zak

This lab prepares samples of plants and soil for biochemical, molecular and isotopic analysis.

Soil Enzymology and DNA Extraction Lab

Dana Building - G532
Professor Don Zak

This lab measures the activity of microbial enzymes that degrade the components of dead plant tissue and to extract microbial DNA from soil.

Molecular Ecology Lab

Dana Building - G533
Professor Don Zak

This lab amplifies portions of microbial DNA to determine the identity of microbial species as well as to determine the abundance and identity of genes that encode enzymes mediating plant-litter decay.

Terrestrial Analytical Lab

Dana Building - G539
Professor Don Zak

This laboratory houses analytical instruments used to quantify the stable isotope composition of biotic samples, the chemical composition of biotic samples and the respiration of microbial cells in soil.

Aquatic Ecosystem Management and Restoration

Professor Mike Wiley, Assistant Research Scientist Catherine Riseng, and Associate Research Scientist Sara Adlerstein Gonzalez

Aquatic Ecosystems Lab

Dana Building - G139

This lab houses staff and equipment to process biological (invertebrates, algae, fish) samples from field surveys of rivers, riparian wetlands and the Great Lakes; a basic water-analysis capacity (including pigments, nutrients and sediment); and prep/storage space for various field transducers, sondes and sonars used in the field.

Aquatic Ecosystem GIS lab

Dana Building - G509

This lab houses specialized analytical, GIS, and river modeling software.

Cooperative Institute for Limnology and Ecosystems Research (CILER)

Dana Building - G110
Professor Allen Burton; associate research scientists Tom Johengen and Dmitry Beletsky; Assistant Research Scientist Eric Anderson; Assistant Research Scientist Hongyan Zhang

Hydrodynamic forecasting

The hydrodynamic forecasting group develops computational models of the Great Lakes and connecting channels in order to understand and predict the physical processes including currents, temperatures and contaminant transport.

Observing systems

CILER plays a leading role in coordinating the implementation of observational technologies for the Great Lakes Observing System. Observing systems include buoys, mooring stations, AUVs, gliders and remote sensing to support both real-time and historical data needs for research, modeling and user interests.

Ecological forecasting

Modelers are trying to understand and predict the impacts of multiple stressors such as hypoxia, harmful algae blooms, invasive species and excessive nutrient loading among others on the structure and function of Great Lakes food-webs.

Agroecology Lab

Dana Building - 3531
Professor Ivette Perfecto

The Agroecology Lab is interested in biological diversity in managed and natural tropical and temperate ecosystems. Research focuses on the effects of agricultural transformation and its impact on biodiversity. Another aspect of the research relates to the ecological function of biodiversity in diverse tropical agroecosystems. More general interest is related to sustainable agriculture and conservation in Latin America as well as the interactions between forests and agroecosystems.

Aquatic Ecosystems Computer Lab

Dana Building - G504

This lab specialized on ecosystem assessment techniques and tools.

Bioinformatics Lab

Dana Building - G536

Environmental Justice Lab

Dana Building - 2575
Professor Dorceta Taylor

Invertebrate Culturing Lab

Dana Building - G310

Metals Analysis Lab

Dana Building - 2548

Terrestrial Ecosystem Lab

Dana Building - G530